mirror of
https://github.com/NVIDIA/dgx-spark-playbooks.git
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246 lines
11 KiB
YAML
246 lines
11 KiB
YAML
kind: Playbook
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metadata:
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name: station-txt2kg
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displayName: Text to Knowledge Graph on DGX Station
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shortDescription: Transform unstructured text into interactive knowledge graphs with LLM inference and graph visualization
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publisher: nvidia
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description: |
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# REPLACE THIS WITH YOUR MODEL CARD
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https://gitlab-master.nvidia.com/api-catalog/examples/-/blob/main/modelcard-example-mixtral8x7b.md?ref_type=heads
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labelsV2:
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- gpuType:playbook:gpu_type_station
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- DGX Station
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- GB300
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- Knowledge Graphs
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- GraphRAG
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- Ollama
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- Graph Visualization
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- NLP
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- Graph Databases
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attributes:
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- key: DURATION
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value: 30 MIN
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spec:
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artifactName: station-txt2kg
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nvcfFunctionId: None
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attributes:
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showUnavailableBanner: false
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apiDocsUrl: None
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termsOfUse: |
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cta:
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text: View on GitHub
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url: https://github.com/NVIDIA/dgx-station-playbooks/blob/main/nvidia/station-txt2kg/
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tabs:
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-
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id: overview
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label: Overview
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content: |
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# Basic idea
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This playbook demonstrates how to build and deploy a comprehensive knowledge graph generation and visualization solution that serves as a reference for knowledge graph extraction.
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The GB300 Ultra's massive GPU memory enables running the Llama 3.1 405B model, producing the highest-quality knowledge graphs and delivering superior downstream GraphRAG performance.
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This txt2kg playbook transforms unstructured text documents into structured knowledge graphs using:
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- **Knowledge Triple Extraction**: Using Ollama with GPU acceleration for local LLM inference to extract subject-predicate-object relationships
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- **Graph Database Storage**: ArangoDB for storing and querying knowledge triples with relationship traversal
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- **GPU-Accelerated Visualization**: Three.js WebGPU rendering for interactive 2D/3D graph exploration
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> **Future Enhancements**: Vector embeddings and GraphRAG capabilities are planned enhancements.
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# What you'll accomplish
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You will have a fully functional system capable of processing documents, generating and editing knowledge graphs, and providing querying, accessible through an interactive web interface.
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The setup includes:
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- **Local LLM Inference**: Ollama for GPU-accelerated LLM inference with no API keys required
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- **Graph Database**: ArangoDB for storing and querying triples with relationship traversal
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- **Interactive Visualization**: GPU-accelerated graph rendering with Three.js WebGPU
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- **Modern Web Interface**: Next.js frontend with document management and query interface
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- **Fully Containerized**: Reproducible deployment with Docker Compose and GPU support
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# What to know before starting
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- Basic Docker container usage
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- Familiarity with command line operations
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- Understanding of knowledge graphs (helpful but not required)
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# Prerequisites
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- NVIDIA DGX Station with GB300 Ultra Blackwell GPU
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- Docker installed and configured with NVIDIA Container Toolkit
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- Docker Compose
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- Network access for container image downloads
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# Ancillary files
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All required assets are in the playbook directory `nvidia/station-txt2kg/assets` (see Step 1). Key files:
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- `start.sh` - Launch script for all services
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- `stop.sh` - Stop script to shut down services
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- `deploy/compose/` - Docker Compose configurations
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# Time & risk
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- **Duration**:
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- 2-3 minutes for initial setup and container deployment
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- 5-10 minutes for Ollama model download (depending on model size)
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- Immediate document processing and knowledge graph generation
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- **Risks**:
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- GPU memory requirements depend on chosen Ollama model size
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- Document processing time scales with document size and complexity
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- **Rollback**: Stop and remove Docker containers, delete downloaded models if needed
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- **Last Updated**: 02/06/2026
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- First Publication
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-
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id: instructions
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label: Instructions
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content: |
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# Step 1. Clone the repository
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This playbook is for **DGX Station**. In a terminal, clone the repository and navigate to the project directory.
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```bash
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git clone https://github.com/NVIDIA/dgx-station-playbooks
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cd dgx-station-playbooks/nvidia/station-txt2kg/assets
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```
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# Step 2. Start the txt2kg services
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Use the provided start script to launch all required services. On DGX Station, if the default backend (Ollama) does not work, use the vLLM backend: `./start.sh --vllm`.
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```bash
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./start.sh
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# If the default backend fails: ./start.sh --vllm
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```
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The script will automatically:
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- Check for GPU availability
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- Start Docker Compose services
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- Set up ArangoDB database
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- Launch the web interface
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# Step 3. Pull the Llama 3.1 405B model
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The default configuration uses Llama 3.1 405B, which leverages the GB300 Ultra's large GPU memory for maximum accuracy in knowledge extraction:
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```bash
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docker exec ollama-compose ollama pull llama3.1:405b
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```
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Browse available models at [https://ollama.com/search](https://ollama.com/search)
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> [!NOTE]
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> The first model download may take 20-30 minutes depending on network speed. For faster initial testing, you can use `llama3.1:70b` or `llama3.1:8b` as alternatives.
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# Step 4. Access the web interface
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> [!NOTE]
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> If you started with **vLLM** (`./start.sh --vllm`), the vLLM backend can take **30 minutes or more** to load the model and initialize. There may be no progress indicator in the CLI or web UI during this time; check container logs with `docker logs` to confirm the server is still loading.
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Open your browser and navigate to:
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```
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http://localhost:3001
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```
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You can also access individual services:
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- **ArangoDB Web Interface**: http://localhost:8529
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- **Ollama API**: http://localhost:11434
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# Step 5. Upload documents and build knowledge graphs
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### 5.1. Document Upload
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- Use the web interface to upload text documents (markdown, text, CSV supported)
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- Documents are automatically chunked and processed for triple extraction
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### 5.2. Knowledge Graph Generation
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- The system extracts subject-predicate-object triples using Ollama
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- Triples are stored in ArangoDB for relationship querying
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### 5.3. Interactive Visualization
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- View your knowledge graph in 2D or 3D with GPU-accelerated rendering
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- Explore nodes and relationships interactively
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### 5.4. Graph-based Queries
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- Ask questions about your documents using the query interface
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- Graph traversal enhances context with entity relationships from ArangoDB
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- LLM generates responses using the enriched graph context
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> **Future Enhancement**: GraphRAG capabilities with vector-based KNN search for entity retrieval are planned.
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# Step 6. Cleanup and rollback
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Remove downloaded models while the container is still running, then stop services:
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```bash
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# Remove downloaded models (optional; run before stopping containers)
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docker exec ollama-compose ollama rm llama3.1:405b
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# Stop services
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docker compose down
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# Remove containers and volumes (optional)
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docker compose down -v
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```
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# Step 7. Next steps
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- On DGX Station, use `./start.sh --vllm` if the default Ollama backend does not work; allow 30+ minutes for vLLM to initialize.
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- Experiment with different Ollama models for varied extraction quality and speed tradeoffs
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- The 405B model provides the highest accuracy; use 70B or 8B for faster processing
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- Customize triple extraction prompts for domain-specific knowledge
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- Explore advanced graph querying and visualization features
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-
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id: troubleshooting
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label: Troubleshooting
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content: |
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# Common issues
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| Symptom | Cause | Fix |
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|---------|--------|-----|
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| Ollama performance issues | Suboptimal settings for GB300 | Set environment variables:<br>`OLLAMA_FLASH_ATTENTION=1` (enables flash attention for better performance)<br>`OLLAMA_KEEP_ALIVE=30m` (keeps model loaded for 30 minutes)<br>`OLLAMA_MAX_LOADED_MODELS=1` (avoids VRAM contention)<br>`OLLAMA_KV_CACHE_TYPE=q8_0` (reduces KV cache VRAM with minimal performance impact) |
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| VRAM exhausted or memory pressure (e.g. when switching between Ollama models) | GPU memory fragmentation | Clear GPU memory: `nvidia-smi --gpu-reset` or restart Docker containers |
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| Slow triple extraction | Large model or large context window | Reduce document chunk size or use faster models |
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| ArangoDB connection refused | Service not fully started | Wait 30s after start.sh, verify with `docker ps` |
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| Container fails to start with GPU error | NVIDIA Container Toolkit not configured | Run `nvidia-ctk runtime configure --runtime=docker` and restart Docker |
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| Port already in use | Previous instance still running | Run `./stop.sh` first or use `docker compose down` |
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| Default backend (Ollama) doesn't work on DGX Station | Backend or model not available | Start with vLLM: `./start.sh --vllm`. Allow 30+ minutes for vLLM to load the model; there may be no progress message in the UI. |
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| No feedback while vLLM is starting | vLLM model load takes a long time | vLLM can take >30 minutes to initialize. Check `docker logs` for the vLLM container to confirm it is still loading. |
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> [!NOTE]
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> DGX Station with GB300 Ultra provides massive GPU memory capacity, enabling you to run larger models (70B+)
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> for higher-quality knowledge extraction. If you encounter memory issues with very large models,
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> try reducing the context window size or using quantized model variants.
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resources:
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- name: Ollama Documentation
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url: https://ollama.ai/
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- name: ArangoDB Documentation
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url: https://docs.arangodb.com/
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